Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.79□□□□□ -0.04
Col7a1Q63870 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.79□□□□□ -0.04
Col7a1Q63870 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Gm15372-201ENSMUST00000120729 834 ntBASIC14.79□□□□□ -0.04
Col7a1Q63870 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.79□□□□□ -0.04
Col7a1Q63870 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.79□□□□□ -0.04
Col7a1Q63870 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.79□□□□□ -0.04
Col7a1Q63870 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col7a1Q63870 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.79□□□□□ -0.04
Col7a1Q63870 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.79□□□□□ -0.04
Col7a1Q63870 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.79□□□□□ -0.04
Col7a1Q63870 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col7a1Q63870 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.79□□□□□ -0.04
Col7a1Q63870 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.78□□□□□ -0.04
Col7a1Q63870 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col7a1Q63870 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.78□□□□□ -0.04
Col7a1Q63870 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.78□□□□□ -0.04
Col7a1Q63870 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.78□□□□□ -0.04
Col7a1Q63870 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Gm15920-201ENSMUST00000118998 402 ntBASIC14.78□□□□□ -0.04
Col7a1Q63870 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col7a1Q63870 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.77□□□□□ -0.04
Col7a1Q63870 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col7a1Q63870 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col7a1Q63870 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col7a1Q63870 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.77□□□□□ -0.04
Col7a1Q63870 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44357-201ENSMUST00000195897 142 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm19658-201ENSMUST00000196231 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44367-201ENSMUST00000196836 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44350-201ENSMUST00000197197 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44390-201ENSMUST00000197533 144 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44313-201ENSMUST00000198018 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44486-201ENSMUST00000198508 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44454-201ENSMUST00000198541 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44314-201ENSMUST00000199263 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44394-201ENSMUST00000199558 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44484-201ENSMUST00000199873 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44466-201ENSMUST00000200264 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Gm44359-201ENSMUST00000200671 138 ntBASIC14.77□□□□□ -0.04
Col7a1Q63870 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Col7a1Q63870 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col7a1Q63870 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col7a1Q63870 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col7a1Q63870 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col7a1Q63870 Gm14494-201ENSMUST00000118786 435 ntBASIC14.77□□□□□ -0.05
Col7a1Q63870 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.77□□□□□ -0.05
Col7a1Q63870 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col7a1Q63870 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Col7a1Q63870 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.77□□□□□ -0.05
Col7a1Q63870 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.77□□□□□ -0.05
Col7a1Q63870 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Col7a1Q63870 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.76□□□□□ -0.05
Col7a1Q63870 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Col7a1Q63870 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col7a1Q63870 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col7a1Q63870 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.76□□□□□ -0.05
Col7a1Q63870 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col7a1Q63870 Gm15165-201ENSMUST00000118140 502 ntBASIC14.76□□□□□ -0.05
Col7a1Q63870 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Col7a1Q63870 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.76□□□□□ -0.05
Col7a1Q63870 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.76□□□□□ -0.05
Col7a1Q63870 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.76□□□□□ -0.05
Col7a1Q63870 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col7a1Q63870 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col7a1Q63870 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.76□□□□□ -0.05
Col7a1Q63870 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col7a1Q63870 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col7a1Q63870 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col7a1Q63870 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col7a1Q63870 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col7a1Q63870 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col7a1Q63870 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.76□□□□□ -0.05
Col7a1Q63870 Chchd1-203ENSMUST00000224633 557 ntBASIC14.76□□□□□ -0.05
Col7a1Q63870 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col7a1Q63870 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms