Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Six3Q62233 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.3■□□□□ 0.36
Six3Q62233 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
Six3Q62233 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.3■□□□□ 0.36
Six3Q62233 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.3■□□□□ 0.36
Six3Q62233 Gm38285-201ENSMUST00000192928 922 ntBASIC17.3■□□□□ 0.36
Six3Q62233 Gm44549-201ENSMUST00000208351 577 ntBASIC17.3■□□□□ 0.36
Six3Q62233 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Six3Q62233 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.3■□□□□ 0.36
Six3Q62233 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Six3Q62233 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Gm26524-201ENSMUST00000192339 390 ntBASIC17.29■□□□□ 0.36
Six3Q62233 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.29■□□□□ 0.36
Six3Q62233 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six3Q62233 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.28■□□□□ 0.36
Six3Q62233 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Six3Q62233 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.28■□□□□ 0.36
Six3Q62233 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Six3Q62233 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.28■□□□□ 0.36
Six3Q62233 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Six3Q62233 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Six3Q62233 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six3Q62233 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.27■□□□□ 0.36
Six3Q62233 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six3Q62233 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six3Q62233 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Six3Q62233 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.27■□□□□ 0.36
Six3Q62233 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Six3Q62233 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.27■□□□□ 0.36
Six3Q62233 Mir5133-201ENSMUST00000174955 77 ntBASIC17.27■□□□□ 0.36
Six3Q62233 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Six3Q62233 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Six3Q62233 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.27■□□□□ 0.36
Six3Q62233 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six3Q62233 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six3Q62233 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Six3Q62233 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six3Q62233 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six3Q62233 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Six3Q62233 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Six3Q62233 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six3Q62233 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six3Q62233 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six3Q62233 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Six3Q62233 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Six3Q62233 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Six3Q62233 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six3Q62233 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.26■□□□□ 0.35
Six3Q62233 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six3Q62233 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Six3Q62233 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.26■□□□□ 0.35
Six3Q62233 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six3Q62233 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six3Q62233 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Six3Q62233 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.26■□□□□ 0.35
Six3Q62233 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.26■□□□□ 0.35
Six3Q62233 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.26■□□□□ 0.35
Six3Q62233 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six3Q62233 Zfp783-201ENSMUST00000095946 670 ntBASIC17.26■□□□□ 0.35
Six3Q62233 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six3Q62233 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms