Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six2Q62232 Gm12527-201ENSMUST00000117967 564 ntBASIC18.87■□□□□ 0.61
Six2Q62232 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
Six2Q62232 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six2Q62232 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.87■□□□□ 0.61
Six2Q62232 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Six2Q62232 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Six2Q62232 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.87■□□□□ 0.61
Six2Q62232 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Six2Q62232 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.87■□□□□ 0.61
Six2Q62232 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six2Q62232 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six2Q62232 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Six2Q62232 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Six2Q62232 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six2Q62232 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Six2Q62232 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.87■□□□□ 0.61
Six2Q62232 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.86■□□□□ 0.61
Six2Q62232 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Six2Q62232 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.86■□□□□ 0.61
Six2Q62232 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Six2Q62232 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Six2Q62232 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.86■□□□□ 0.61
Six2Q62232 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Six2Q62232 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.86■□□□□ 0.61
Six2Q62232 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Six2Q62232 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Six2Q62232 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six2Q62232 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.86■□□□□ 0.61
Six2Q62232 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Six2Q62232 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.85■□□□□ 0.61
Six2Q62232 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Six2Q62232 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.85■□□□□ 0.61
Six2Q62232 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.85■□□□□ 0.61
Six2Q62232 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Six2Q62232 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Six2Q62232 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Six2Q62232 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.84■□□□□ 0.61
Six2Q62232 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Six2Q62232 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Six2Q62232 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Gm11643-201ENSMUST00000119578 864 ntBASIC18.84■□□□□ 0.61
Six2Q62232 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Six2Q62232 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six2Q62232 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.83■□□□□ 0.61
Six2Q62232 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Six2Q62232 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six2Q62232 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.83■□□□□ 0.61
Six2Q62232 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six2Q62232 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Six2Q62232 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six2Q62232 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.83■□□□□ 0.6
Six2Q62232 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Six2Q62232 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six2Q62232 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.83■□□□□ 0.6
Six2Q62232 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six2Q62232 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six2Q62232 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms