Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Six1Q62231 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Six1Q62231 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Six1Q62231 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Six1Q62231 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six1Q62231 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six1Q62231 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Six1Q62231 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.18■□□□□ 0.5
Six1Q62231 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Six1Q62231 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Six1Q62231 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Six1Q62231 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.18■□□□□ 0.5
Six1Q62231 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Six1Q62231 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Six1Q62231 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.18■□□□□ 0.5
Six1Q62231 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six1Q62231 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.17■□□□□ 0.5
Six1Q62231 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.17■□□□□ 0.5
Six1Q62231 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.17■□□□□ 0.5
Six1Q62231 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Six1Q62231 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Six1Q62231 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Six1Q62231 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.17■□□□□ 0.5
Six1Q62231 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six1Q62231 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Six1Q62231 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Six1Q62231 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Six1Q62231 Gm13401-201ENSMUST00000117074 291 ntBASIC18.16■□□□□ 0.5
Six1Q62231 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Six1Q62231 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Six1Q62231 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six1Q62231 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.15■□□□□ 0.5
Six1Q62231 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.15■□□□□ 0.5
Six1Q62231 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Six1Q62231 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.15■□□□□ 0.5
Six1Q62231 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six1Q62231 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.14■□□□□ 0.5
Six1Q62231 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six1Q62231 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six1Q62231 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Six1Q62231 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.14■□□□□ 0.49
Six1Q62231 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Six1Q62231 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Six1Q62231 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.14■□□□□ 0.49
Six1Q62231 Gm42569-201ENSMUST00000200539 472 ntBASIC18.14■□□□□ 0.49
Six1Q62231 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Six1Q62231 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six1Q62231 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Six1Q62231 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Gm11927-201ENSMUST00000118472 759 ntBASIC18.13■□□□□ 0.49
Six1Q62231 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.13■□□□□ 0.49
Six1Q62231 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.13■□□□□ 0.49
Six1Q62231 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.13■□□□□ 0.49
Six1Q62231 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms