Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.61■□□□□ 0.73
Ift88Q61371 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.61■□□□□ 0.73
Ift88Q61371 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.61■□□□□ 0.73
Ift88Q61371 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.61■□□□□ 0.73
Ift88Q61371 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.61■□□□□ 0.73
Ift88Q61371 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Ift88Q61371 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Ift88Q61371 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.6■□□□□ 0.73
Ift88Q61371 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ift88Q61371 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.6■□□□□ 0.73
Ift88Q61371 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ift88Q61371 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift88Q61371 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.6■□□□□ 0.73
Ift88Q61371 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.59■□□□□ 0.73
Ift88Q61371 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.59■□□□□ 0.73
Ift88Q61371 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.59■□□□□ 0.73
Ift88Q61371 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.59■□□□□ 0.73
Ift88Q61371 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Gm42642-201ENSMUST00000200683 355 ntBASIC19.59■□□□□ 0.73
Ift88Q61371 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.59■□□□□ 0.73
Ift88Q61371 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ift88Q61371 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.59■□□□□ 0.73
Ift88Q61371 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ift88Q61371 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift88Q61371 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.58■□□□□ 0.73
Ift88Q61371 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ift88Q61371 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.58■□□□□ 0.73
Ift88Q61371 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ift88Q61371 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ift88Q61371 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ift88Q61371 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ift88Q61371 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ift88Q61371 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ift88Q61371 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ift88Q61371 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ift88Q61371 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ift88Q61371 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ift88Q61371 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift88Q61371 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift88Q61371 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ift88Q61371 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Ift88Q61371 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ift88Q61371 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift88Q61371 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift88Q61371 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.57■□□□□ 0.72
Ift88Q61371 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.56■□□□□ 0.72
Ift88Q61371 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.56■□□□□ 0.72
Ift88Q61371 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.56■□□□□ 0.72
Ift88Q61371 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.56■□□□□ 0.72
Ift88Q61371 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.56■□□□□ 0.72
Ift88Q61371 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ift88Q61371 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift88Q61371 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms