Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a4Q60857 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a4Q60857 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.13■□□□□ 0.49
Slc6a4Q60857 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a4Q60857 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.12■□□□□ 0.49
Slc6a4Q60857 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.12■□□□□ 0.49
Slc6a4Q60857 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a4Q60857 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Slc6a4Q60857 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.11■□□□□ 0.49
Slc6a4Q60857 Gm11539-201ENSMUST00000119837 557 ntBASIC18.11■□□□□ 0.49
Slc6a4Q60857 Gm13436-201ENSMUST00000120418 567 ntBASIC18.11■□□□□ 0.49
Slc6a4Q60857 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.11■□□□□ 0.49
Slc6a4Q60857 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Gm9987-201ENSMUST00000069768 567 ntBASIC18.11■□□□□ 0.49
Slc6a4Q60857 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Idnk-204ENSMUST00000226010 1898 ntBASIC18.11■□□□□ 0.49
Slc6a4Q60857 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a4Q60857 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.1■□□□□ 0.49
Slc6a4Q60857 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Gm13836-201ENSMUST00000121159 501 ntBASIC18.1■□□□□ 0.49
Slc6a4Q60857 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc6a4Q60857 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Grk6-206ENSMUST00000224995 2971 ntBASIC18.1■□□□□ 0.49
Slc6a4Q60857 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a4Q60857 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a4Q60857 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a4Q60857 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms