Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col27a1Q5QNQ9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Rps4l-201ENSMUST00000071745 943 ntBASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Col27a1Q5QNQ9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col27a1Q5QNQ9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col27a1Q5QNQ9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Col27a1Q5QNQ9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col27a1Q5QNQ9 Gm10052-201ENSMUST00000168019 960 ntBASIC17.14■□□□□ 0.34
Col27a1Q5QNQ9 Gm18195-201ENSMUST00000207604 706 ntBASIC17.14■□□□□ 0.34
Col27a1Q5QNQ9 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.14■□□□□ 0.34
Col27a1Q5QNQ9 Gm7729-201ENSMUST00000050143 801 ntBASIC17.14■□□□□ 0.34
Col27a1Q5QNQ9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Col27a1Q5QNQ9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Mir5126-201ENSMUST00000175513 77 ntBASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.14■□□□□ 0.33
Col27a1Q5QNQ9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col27a1Q5QNQ9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col27a1Q5QNQ9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col27a1Q5QNQ9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Col27a1Q5QNQ9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col27a1Q5QNQ9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col27a1Q5QNQ9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.12■□□□□ 0.33
Col27a1Q5QNQ9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms