Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Trim41Q5NCC3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Trim41Q5NCC3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC30.71■■■□□ 2.51
Trim41Q5NCC3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Gm43213-201ENSMUST00000151866 1790 ntBASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Trim41Q5NCC3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Trim41Q5NCC3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Trim41Q5NCC3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
Trim41Q5NCC3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trim41Q5NCC3 Gm13401-201ENSMUST00000117074 291 ntBASIC30.69■■■□□ 2.5
Trim41Q5NCC3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trim41Q5NCC3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Trim41Q5NCC3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trim41Q5NCC3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Trim41Q5NCC3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC30.68■■■□□ 2.5
Trim41Q5NCC3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Trim41Q5NCC3 Gm24589-201ENSMUST00000116692 94 ntBASIC30.68■■■□□ 2.5
Trim41Q5NCC3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Trim41Q5NCC3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Trim41Q5NCC3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Trim41Q5NCC3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Trim41Q5NCC3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC30.67■■■□□ 2.5
Trim41Q5NCC3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Trim41Q5NCC3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Trim41Q5NCC3 Gm2274-201ENSMUST00000184539 609 ntBASIC30.67■■■□□ 2.5
Trim41Q5NCC3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Trim41Q5NCC3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Trim41Q5NCC3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Trim41Q5NCC3 Gm8258-201ENSMUST00000055593 1449 ntBASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim41Q5NCC3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Trim41Q5NCC3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC30.65■■■□□ 2.5
Trim41Q5NCC3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Trim41Q5NCC3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Trim41Q5NCC3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
Trim41Q5NCC3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC30.65■■■□□ 2.5
Trim41Q5NCC3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC30.65■■■□□ 2.5
Trim41Q5NCC3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Trim41Q5NCC3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trim41Q5NCC3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC30.64■■■□□ 2.5
Trim41Q5NCC3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Trim41Q5NCC3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trim41Q5NCC3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC30.64■■■□□ 2.5
Trim41Q5NCC3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trim41Q5NCC3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trim41Q5NCC3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.49
Trim41Q5NCC3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC30.64■■■□□ 2.49
Trim41Q5NCC3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Trim41Q5NCC3 Gm43231-201ENSMUST00000202960 2258 ntBASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Gm24841-201ENSMUST00000158676 357 ntBASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Gm18958-201ENSMUST00000174258 762 ntBASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Trim41Q5NCC3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Mir5130-201ENSMUST00000175160 84 ntBASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Gm22697-201ENSMUST00000175194 63 ntBASIC30.62■■■□□ 2.49
Trim41Q5NCC3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Gm8784-201ENSMUST00000222096 1435 ntBASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Trim41Q5NCC3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim41Q5NCC3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim41Q5NCC3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim41Q5NCC3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC30.61■■■□□ 2.49
Trim41Q5NCC3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Trim41Q5NCC3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim41Q5NCC3 Gm43073-201ENSMUST00000198200 1189 ntBASIC30.61■■■□□ 2.49
Trim41Q5NCC3 Gm29791-202ENSMUST00000207888 369 ntBASIC30.61■■■□□ 2.49
Trim41Q5NCC3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC30.61■■■□□ 2.49
Trim41Q5NCC3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms