Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Gm5874-201ENSMUST00000096101 508 ntBASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clhc1Q5M6W3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clhc1Q5M6W3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clhc1Q5M6W3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clhc1Q5M6W3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.08■□□□□ 0.33
Clhc1Q5M6W3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clhc1Q5M6W3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clhc1Q5M6W3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Gm13234-201ENSMUST00000120010 747 ntBASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clhc1Q5M6W3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Dancr-204ENSMUST00000132389 2347 ntBASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clhc1Q5M6W3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Gm18671-201ENSMUST00000214826 683 ntBASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clhc1Q5M6W3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms