Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Gm4974-201ENSMUST00000209974 875 ntBASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx49Q4FZF3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.53■□□□□ 0.88
Ddx49Q4FZF3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Gm27704-201ENSMUST00000185094 107 ntBASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Gm7461-201ENSMUST00000058918 827 ntBASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx49Q4FZF3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ddx49Q4FZF3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ddx49Q4FZF3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ddx49Q4FZF3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx49Q4FZF3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx49Q4FZF3 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.51■□□□□ 0.87
Ddx49Q4FZF3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.51■□□□□ 0.87
Ddx49Q4FZF3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ddx49Q4FZF3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ddx49Q4FZF3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx49Q4FZF3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.5■□□□□ 0.87
Ddx49Q4FZF3 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Gm21559-201ENSMUST00000220638 855 ntBASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Gm8587-201ENSMUST00000076538 843 ntBASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx49Q4FZF3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Gm28033-201ENSMUST00000184224 96 ntBASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Gm7791-201ENSMUST00000219066 539 ntBASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx49Q4FZF3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx49Q4FZF3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx49Q4FZF3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.47■□□□□ 0.87
Ddx49Q4FZF3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.47■□□□□ 0.87
Ddx49Q4FZF3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx49Q4FZF3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ddx49Q4FZF3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms