Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin28bQ45KJ6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin28bQ45KJ6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin28bQ45KJ6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lin28bQ45KJ6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lin28bQ45KJ6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lin28bQ45KJ6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Lin28bQ45KJ6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms