Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ckap2Q3V1H1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap2Q3V1H1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap2Q3V1H1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ckap2Q3V1H1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.28■□□□□ 0.84
Ckap2Q3V1H1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Gm22240-201ENSMUST00000175225 82 ntBASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.27■□□□□ 0.84
Ckap2Q3V1H1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ckap2Q3V1H1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ckap2Q3V1H1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap2Q3V1H1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms