Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Gm10517-202ENSMUST00000192970 758 ntBASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Gm7977-201ENSMUST00000193787 748 ntBASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Naf1Q3UMQ8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Gm11539-201ENSMUST00000119837 557 ntBASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Gm13436-201ENSMUST00000120418 567 ntBASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Fst-202ENSMUST00000223640 2612 ntBASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Naf1Q3UMQ8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Gm13401-201ENSMUST00000117074 291 ntBASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Naf1Q3UMQ8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Gm6433-201ENSMUST00000118634 875 ntBASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Gm13559-201ENSMUST00000120476 863 ntBASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Naf1Q3UMQ8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms