Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Gm10418-201ENSMUST00000100943 576 ntBASIC21.36■■□□□ 1.01
Carmil3Q3UFQ8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Carmil3Q3UFQ8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Carmil3Q3UFQ8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Carmil3Q3UFQ8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Carmil3Q3UFQ8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Carmil3Q3UFQ8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Carmil3Q3UFQ8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Carmil3Q3UFQ8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Carmil3Q3UFQ8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Carmil3Q3UFQ8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Carmil3Q3UFQ8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.33■■□□□ 1
Carmil3Q3UFQ8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Gm16061-201ENSMUST00000122167 857 ntBASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Gm22697-201ENSMUST00000175194 63 ntBASIC21.32■■□□□ 1
Carmil3Q3UFQ8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.32■■□□□ 1
Carmil3Q3UFQ8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.32■■□□□ 1
Carmil3Q3UFQ8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.31■■□□□ 1
Carmil3Q3UFQ8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Carmil3Q3UFQ8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Gm13401-201ENSMUST00000117074 291 ntBASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.29■■□□□ 1
Carmil3Q3UFQ8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms