Protein–RNA interactions for Protein: Q3THK3

Gtf2f1, General transcription factor IIF subunit 1, mousemouse

Known RBP Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2f1Q3THK3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf2f1Q3THK3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf2f1Q3THK3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Gm4968-201ENSMUST00000071458 858 ntBASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.33■□□□□ 0.85
Gtf2f1Q3THK3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Gtf2f1Q3THK3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gtf2f1Q3THK3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2f1Q3THK3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2f1Q3THK3 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.3■□□□□ 0.84
Gtf2f1Q3THK3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2f1Q3THK3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms