Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Mtag2-201ENSMUST00000058665 714 ntBASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Khdc4Q3TCX3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Khdc4Q3TCX3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Khdc4Q3TCX3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Khdc4Q3TCX3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.83■□□□□ 0.28
Khdc4Q3TCX3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc4Q3TCX3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc4Q3TCX3 Grk6-206ENSMUST00000224995 2971 ntBASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc4Q3TCX3 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms