Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd8Q09XV5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Gm11424-201ENSMUST00000121929 829 ntBASIC15.91■□□□□ 0.14
Chd8Q09XV5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.91■□□□□ 0.14
Chd8Q09XV5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd8Q09XV5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Actl10-202ENSMUST00000226583 1501 ntBASIC15.9■□□□□ 0.14
Chd8Q09XV5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.9■□□□□ 0.14
Chd8Q09XV5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd8Q09XV5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Gm14127-201ENSMUST00000117906 678 ntBASIC15.89■□□□□ 0.13
Chd8Q09XV5 Mir2861-201ENSMUST00000175539 82 ntBASIC15.89■□□□□ 0.13
Chd8Q09XV5 Mir6977-201ENSMUST00000184960 64 ntBASIC15.89■□□□□ 0.13
Chd8Q09XV5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Chd8Q09XV5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Gm14140-201ENSMUST00000119999 995 ntBASIC15.88■□□□□ 0.13
Chd8Q09XV5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Gm8396-201ENSMUST00000057361 823 ntBASIC15.88■□□□□ 0.13
Chd8Q09XV5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd8Q09XV5 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.88■□□□□ 0.13
Chd8Q09XV5 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.88■□□□□ 0.13
Chd8Q09XV5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.87■□□□□ 0.13
Chd8Q09XV5 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.87■□□□□ 0.13
Chd8Q09XV5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms