Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 Gm12527-201ENSMUST00000117967 564 ntBASIC13.71□□□□□ -0.21
Cdx4Q07424 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdx4Q07424 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx4Q07424 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cdx4Q07424 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx4Q07424 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx4Q07424 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx4Q07424 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx4Q07424 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdx4Q07424 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Gm13168-201ENSMUST00000121771 632 ntBASIC13.7□□□□□ -0.22
Cdx4Q07424 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdx4Q07424 Trmt13-210ENSMUST00000198454 880 ntBASIC13.7□□□□□ -0.22
Cdx4Q07424 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx4Q07424 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdx4Q07424 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.69□□□□□ -0.22
Cdx4Q07424 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdx4Q07424 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdx4Q07424 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.69□□□□□ -0.22
Cdx4Q07424 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdx4Q07424 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.69□□□□□ -0.22
Cdx4Q07424 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.69□□□□□ -0.22
Cdx4Q07424 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdx4Q07424 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx4Q07424 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx4Q07424 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx4Q07424 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.68□□□□□ -0.22
Cdx4Q07424 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cdx4Q07424 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx4Q07424 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx4Q07424 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdx4Q07424 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx4Q07424 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx4Q07424 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx4Q07424 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx4Q07424 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdx4Q07424 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.67□□□□□ -0.22
Cdx4Q07424 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.67□□□□□ -0.22
Cdx4Q07424 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.67□□□□□ -0.22
Cdx4Q07424 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdx4Q07424 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Gm10812-201ENSMUST00000099864 546 ntBASIC13.67□□□□□ -0.22
Cdx4Q07424 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdx4Q07424 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdx4Q07424 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdx4Q07424 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdx4Q07424 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdx4Q07424 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdx4Q07424 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdx4Q07424 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdx4Q07424 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdx4Q07424 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdx4Q07424 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdx4Q07424 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdx4Q07424 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms