Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npas1P97459 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npas1P97459 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npas1P97459 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npas1P97459 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npas1P97459 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Npas1P97459 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npas1P97459 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npas1P97459 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npas1P97459 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.85□□□□□ -0.03
Npas1P97459 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Npas1P97459 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.84□□□□□ -0.03
Npas1P97459 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.84□□□□□ -0.03
Npas1P97459 Gm21956-201ENSMUST00000179946 522 ntBASIC14.84□□□□□ -0.03
Npas1P97459 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Npas1P97459 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.84□□□□□ -0.03
Npas1P97459 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Npas1P97459 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Npas1P97459 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npas1P97459 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Npas1P97459 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Npas1P97459 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Npas1P97459 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Npas1P97459 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Npas1P97459 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.83□□□□□ -0.04
Npas1P97459 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.83□□□□□ -0.04
Npas1P97459 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Npas1P97459 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.83□□□□□ -0.04
Npas1P97459 Gm27801-201ENSMUST00000184174 223 ntBASIC14.83□□□□□ -0.04
Npas1P97459 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Npas1P97459 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Npas1P97459 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npas1P97459 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.82□□□□□ -0.04
Npas1P97459 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Npas1P97459 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Npas1P97459 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.82□□□□□ -0.04
Npas1P97459 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.82□□□□□ -0.04
Npas1P97459 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Npas1P97459 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Npas1P97459 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Npas1P97459 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Npas1P97459 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Mir7075-201ENSMUST00000184187 82 ntBASIC14.81□□□□□ -0.04
Npas1P97459 Gm43173-201ENSMUST00000202246 593 ntBASIC14.81□□□□□ -0.04
Npas1P97459 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.81□□□□□ -0.04
Npas1P97459 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Npas1P97459 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Npas1P97459 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Npas1P97459 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Npas1P97459 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Npas1P97459 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms