Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pkp1P97350 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.7■□□□□ 0.9
Pkp1P97350 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.7■□□□□ 0.9
Pkp1P97350 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.7■□□□□ 0.9
Pkp1P97350 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Pkp1P97350 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.7■□□□□ 0.9
Pkp1P97350 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkp1P97350 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.69■□□□□ 0.9
Pkp1P97350 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.69■□□□□ 0.9
Pkp1P97350 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Pkp1P97350 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.69■□□□□ 0.9
Pkp1P97350 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.69■□□□□ 0.9
Pkp1P97350 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pkp1P97350 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkp1P97350 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.69■□□□□ 0.9
Pkp1P97350 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pkp1P97350 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Pkp1P97350 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pkp1P97350 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pkp1P97350 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pkp1P97350 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.68■□□□□ 0.9
Pkp1P97350 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pkp1P97350 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.68■□□□□ 0.9
Pkp1P97350 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.68■□□□□ 0.9
Pkp1P97350 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pkp1P97350 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pkp1P97350 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pkp1P97350 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.68■□□□□ 0.9
Pkp1P97350 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.68■□□□□ 0.9
Pkp1P97350 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pkp1P97350 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.68■□□□□ 0.9
Pkp1P97350 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pkp1P97350 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pkp1P97350 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 Gm15375-201ENSMUST00000119510 849 ntBASIC20.67■□□□□ 0.9
Pkp1P97350 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.67■□□□□ 0.9
Pkp1P97350 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.67■□□□□ 0.9
Pkp1P97350 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 Mir8112-201ENSMUST00000184382 131 ntBASIC20.67■□□□□ 0.9
Pkp1P97350 Gm10138-203ENSMUST00000206952 366 ntBASIC20.67■□□□□ 0.9
Pkp1P97350 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pkp1P97350 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.66■□□□□ 0.9
Pkp1P97350 Gm37856-201ENSMUST00000191634 999 ntBASIC20.66■□□□□ 0.9
Pkp1P97350 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.66■□□□□ 0.9
Pkp1P97350 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Pkp1P97350 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.66■□□□□ 0.9
Pkp1P97350 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pkp1P97350 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.65■□□□□ 0.9
Pkp1P97350 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkp1P97350 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms