Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
PrkdcP97313 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.2□□□□□ -0.46
PrkdcP97313 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
PrkdcP97313 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.2□□□□□ -0.46
PrkdcP97313 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.2□□□□□ -0.46
PrkdcP97313 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.2□□□□□ -0.46
PrkdcP97313 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
PrkdcP97313 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.2□□□□□ -0.46
PrkdcP97313 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PrkdcP97313 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.19□□□□□ -0.46
PrkdcP97313 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.19□□□□□ -0.46
PrkdcP97313 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.19□□□□□ -0.46
PrkdcP97313 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
PrkdcP97313 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
PrkdcP97313 Gm24841-201ENSMUST00000158676 357 ntBASIC12.19□□□□□ -0.46
PrkdcP97313 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.19□□□□□ -0.46
PrkdcP97313 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.19□□□□□ -0.46
PrkdcP97313 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.19□□□□□ -0.46
PrkdcP97313 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.19□□□□□ -0.46
PrkdcP97313 Gm14057-201ENSMUST00000120631 482 ntBASIC12.19□□□□□ -0.46
PrkdcP97313 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.19□□□□□ -0.46
PrkdcP97313 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PrkdcP97313 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.18□□□□□ -0.46
PrkdcP97313 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
PrkdcP97313 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
PrkdcP97313 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.18□□□□□ -0.46
PrkdcP97313 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Gm15467-201ENSMUST00000120582 445 ntBASIC12.18□□□□□ -0.46
PrkdcP97313 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.18□□□□□ -0.46
PrkdcP97313 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PrkdcP97313 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.18□□□□□ -0.46
PrkdcP97313 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PrkdcP97313 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
PrkdcP97313 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
PrkdcP97313 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Gm10175-201ENSMUST00000086013 645 ntBASIC12.17□□□□□ -0.46
PrkdcP97313 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Gm13401-201ENSMUST00000117074 291 ntBASIC12.17□□□□□ -0.46
PrkdcP97313 Gm2756-201ENSMUST00000195851 400 ntBASIC12.17□□□□□ -0.46
PrkdcP97313 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.17□□□□□ -0.46
PrkdcP97313 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PrkdcP97313 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Gm11779-201ENSMUST00000118541 368 ntBASIC12.17□□□□□ -0.46
PrkdcP97313 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.17□□□□□ -0.46
PrkdcP97313 Gm25911-201ENSMUST00000157621 56 ntBASIC12.17□□□□□ -0.46
PrkdcP97313 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
PrkdcP97313 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PrkdcP97313 Gm15372-201ENSMUST00000120729 834 ntBASIC12.16□□□□□ -0.46
PrkdcP97313 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.16□□□□□ -0.46
PrkdcP97313 Gm10576-201ENSMUST00000191927 825 ntBASIC12.16□□□□□ -0.46
PrkdcP97313 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms