Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.34□□□□□ -0.11
Lmo4P61969 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lmo4P61969 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lmo4P61969 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Lmo4P61969 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lmo4P61969 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lmo4P61969 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lmo4P61969 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lmo4P61969 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Lmo4P61969 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lmo4P61969 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.33□□□□□ -0.11
Lmo4P61969 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lmo4P61969 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Gm10013-201ENSMUST00000106074 672 ntBASIC14.33□□□□□ -0.12
Lmo4P61969 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.33□□□□□ -0.12
Lmo4P61969 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.33□□□□□ -0.12
Lmo4P61969 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.33□□□□□ -0.12
Lmo4P61969 Gm7791-201ENSMUST00000219066 539 ntBASIC14.33□□□□□ -0.12
Lmo4P61969 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Fst-202ENSMUST00000223640 2612 ntBASIC14.33□□□□□ -0.12
Lmo4P61969 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lmo4P61969 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.33□□□□□ -0.12
Lmo4P61969 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lmo4P61969 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lmo4P61969 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Lmo4P61969 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Lmo4P61969 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.32□□□□□ -0.12
Lmo4P61969 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.32□□□□□ -0.12
Lmo4P61969 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.32□□□□□ -0.12
Lmo4P61969 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Lmo4P61969 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.32□□□□□ -0.12
Lmo4P61969 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lmo4P61969 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Lmo4P61969 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lmo4P61969 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lmo4P61969 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lmo4P61969 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lmo4P61969 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmo4P61969 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.31□□□□□ -0.12
Lmo4P61969 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.31□□□□□ -0.12
Lmo4P61969 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.31□□□□□ -0.12
Lmo4P61969 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.31□□□□□ -0.12
Lmo4P61969 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lmo4P61969 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.31□□□□□ -0.12
Lmo4P61969 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.31□□□□□ -0.12
Lmo4P61969 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmo4P61969 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.3□□□□□ -0.12
Lmo4P61969 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.3□□□□□ -0.12
Lmo4P61969 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.3□□□□□ -0.12
Lmo4P61969 Gm23634-201ENSMUST00000175071 91 ntBASIC14.3□□□□□ -0.12
Lmo4P61969 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.3□□□□□ -0.12
Lmo4P61969 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lmo4P61969 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms