Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Lim2P56563 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.68■□□□□ 0.42
Lim2P56563 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.68■□□□□ 0.42
Lim2P56563 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Mir6349-201ENSMUST00000184059 97 ntBASIC17.68■□□□□ 0.42
Lim2P56563 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lim2P56563 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lim2P56563 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lim2P56563 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lim2P56563 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Idnk-204ENSMUST00000226010 1898 ntBASIC17.67■□□□□ 0.42
Lim2P56563 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Lim2P56563 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.67■□□□□ 0.42
Lim2P56563 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lim2P56563 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lim2P56563 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Lim2P56563 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.67■□□□□ 0.42
Lim2P56563 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.66■□□□□ 0.42
Lim2P56563 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Lim2P56563 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.66■□□□□ 0.42
Lim2P56563 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.66■□□□□ 0.42
Lim2P56563 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.66■□□□□ 0.42
Lim2P56563 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.66■□□□□ 0.42
Lim2P56563 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Lim2P56563 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lim2P56563 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.66■□□□□ 0.42
Lim2P56563 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.66■□□□□ 0.42
Lim2P56563 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lim2P56563 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lim2P56563 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lim2P56563 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lim2P56563 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.65■□□□□ 0.42
Lim2P56563 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.65■□□□□ 0.42
Lim2P56563 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Lim2P56563 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lim2P56563 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.65■□□□□ 0.42
Lim2P56563 Mir2861-201ENSMUST00000175539 82 ntBASIC17.65■□□□□ 0.42
Lim2P56563 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.65■□□□□ 0.42
Lim2P56563 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Lim2P56563 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lim2P56563 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.65■□□□□ 0.42
Lim2P56563 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lim2P56563 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lim2P56563 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lim2P56563 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lim2P56563 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lim2P56563 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lim2P56563 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Lim2P56563 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.64■□□□□ 0.41
Lim2P56563 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lim2P56563 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lim2P56563 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lim2P56563 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.64■□□□□ 0.41
Lim2P56563 Gm18025-201ENSMUST00000221733 862 ntBASIC17.64■□□□□ 0.41
Lim2P56563 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lim2P56563 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lim2P56563 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lim2P56563 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lim2P56563 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lim2P56563 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Lim2P56563 Gm42545-201ENSMUST00000202755 922 ntBASIC17.63■□□□□ 0.41
Lim2P56563 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms