Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.68■□□□□ 0.9
Cacnb3P54285 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Cacnb3P54285 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.67■□□□□ 0.9
Cacnb3P54285 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cacnb3P54285 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb3P54285 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.67■□□□□ 0.9
Cacnb3P54285 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cacnb3P54285 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cacnb3P54285 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacnb3P54285 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 Gm7370-201ENSMUST00000219471 767 ntBASIC20.66■□□□□ 0.9
Cacnb3P54285 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cacnb3P54285 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cacnb3P54285 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.66■□□□□ 0.9
Cacnb3P54285 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cacnb3P54285 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb3P54285 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacnb3P54285 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cacnb3P54285 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb3P54285 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb3P54285 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb3P54285 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb3P54285 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cacnb3P54285 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.65■□□□□ 0.9
Cacnb3P54285 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.65■□□□□ 0.9
Cacnb3P54285 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cacnb3P54285 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb3P54285 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb3P54285 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb3P54285 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb3P54285 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.64■□□□□ 0.9
Cacnb3P54285 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacnb3P54285 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacnb3P54285 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Gm16061-201ENSMUST00000122167 857 ntBASIC20.64■□□□□ 0.89
Cacnb3P54285 Gm29791-202ENSMUST00000207888 369 ntBASIC20.64■□□□□ 0.89
Cacnb3P54285 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cacnb3P54285 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb3P54285 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb3P54285 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb3P54285 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb3P54285 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb3P54285 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb3P54285 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cacnb3P54285 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.63■□□□□ 0.89
Cacnb3P54285 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cacnb3P54285 Ank2-226ENSMUST00000189368 339 ntBASIC20.63■□□□□ 0.89
Cacnb3P54285 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.63■□□□□ 0.89
Cacnb3P54285 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb3P54285 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Cacnb3P54285 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb3P54285 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb3P54285 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cacnb3P54285 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cacnb3P54285 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cacnb3P54285 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Gm27741-201ENSMUST00000185060 237 ntBASIC20.62■□□□□ 0.89
Cacnb3P54285 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb3P54285 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms