Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nek1P51954 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nek1P51954 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nek1P51954 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek1P51954 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.71■□□□□ 0.75
Nek1P51954 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.71■□□□□ 0.75
Nek1P51954 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.71■□□□□ 0.75
Nek1P51954 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.71■□□□□ 0.75
Nek1P51954 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.71■□□□□ 0.75
Nek1P51954 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek1P51954 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.7■□□□□ 0.74
Nek1P51954 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.7■□□□□ 0.74
Nek1P51954 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.7■□□□□ 0.74
Nek1P51954 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.7■□□□□ 0.74
Nek1P51954 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.7■□□□□ 0.74
Nek1P51954 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek1P51954 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.69■□□□□ 0.74
Nek1P51954 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.69■□□□□ 0.74
Nek1P51954 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.69■□□□□ 0.74
Nek1P51954 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.69■□□□□ 0.74
Nek1P51954 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.69■□□□□ 0.74
Nek1P51954 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.69■□□□□ 0.74
Nek1P51954 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.69■□□□□ 0.74
Nek1P51954 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nek1P51954 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek1P51954 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek1P51954 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek1P51954 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.68■□□□□ 0.74
Nek1P51954 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.68■□□□□ 0.74
Nek1P51954 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.68■□□□□ 0.74
Nek1P51954 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nek1P51954 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek1P51954 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek1P51954 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.67■□□□□ 0.74
Nek1P51954 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.67■□□□□ 0.74
Nek1P51954 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nek1P51954 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.67■□□□□ 0.74
Nek1P51954 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.67■□□□□ 0.74
Nek1P51954 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nek1P51954 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek1P51954 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek1P51954 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Nek1P51954 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms