Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atoh1P48985 Gm18115-201ENSMUST00000221209 621 ntBASIC20.06■□□□□ 0.8
Atoh1P48985 Gm10566-201ENSMUST00000086739 996 ntBASIC20.06■□□□□ 0.8
Atoh1P48985 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atoh1P48985 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atoh1P48985 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Atoh1P48985 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Atoh1P48985 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atoh1P48985 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Atoh1P48985 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atoh1P48985 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Atoh1P48985 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.05■□□□□ 0.8
Atoh1P48985 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atoh1P48985 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Atoh1P48985 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Atoh1P48985 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Gm29791-202ENSMUST00000207888 369 ntBASIC20.04■□□□□ 0.8
Atoh1P48985 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Atoh1P48985 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Atoh1P48985 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.04■□□□□ 0.8
Atoh1P48985 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Atoh1P48985 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Atoh1P48985 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atoh1P48985 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Atoh1P48985 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atoh1P48985 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Atoh1P48985 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atoh1P48985 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atoh1P48985 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.03■□□□□ 0.8
Atoh1P48985 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atoh1P48985 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Atoh1P48985 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.03■□□□□ 0.8
Atoh1P48985 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atoh1P48985 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atoh1P48985 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Atoh1P48985 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.03■□□□□ 0.8
Atoh1P48985 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Atoh1P48985 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Atoh1P48985 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.02■□□□□ 0.8
Atoh1P48985 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atoh1P48985 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
Atoh1P48985 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atoh1P48985 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atoh1P48985 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atoh1P48985 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atoh1P48985 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Atoh1P48985 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atoh1P48985 Mir770-201ENSMUST00000103252 94 ntBASIC20.01■□□□□ 0.79
Atoh1P48985 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Atoh1P48985 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.01■□□□□ 0.79
Atoh1P48985 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.01■□□□□ 0.79
Atoh1P48985 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.01■□□□□ 0.79
Atoh1P48985 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atoh1P48985 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atoh1P48985 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Atoh1P48985 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atoh1P48985 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atoh1P48985 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.01■□□□□ 0.79
Atoh1P48985 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atoh1P48985 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Atoh1P48985 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atoh1P48985 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atoh1P48985 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20■□□□□ 0.79
Atoh1P48985 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20■□□□□ 0.79
Atoh1P48985 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atoh1P48985 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Atoh1P48985 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atoh1P48985 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atoh1P48985 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atoh1P48985 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atoh1P48985 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Atoh1P48985 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Atoh1P48985 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atoh1P48985 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atoh1P48985 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atoh1P48985 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.99■□□□□ 0.79
Atoh1P48985 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atoh1P48985 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.99■□□□□ 0.79
Atoh1P48985 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atoh1P48985 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms