Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps4bP46467 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps4bP46467 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps4bP46467 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps4bP46467 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4bP46467 Idnk-204ENSMUST00000226010 1898 ntBASIC17.95■□□□□ 0.46
Vps4bP46467 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps4bP46467 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vps4bP46467 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4bP46467 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vps4bP46467 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vps4bP46467 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.93■□□□□ 0.46
Vps4bP46467 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.93■□□□□ 0.46
Vps4bP46467 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Vps4bP46467 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Vps4bP46467 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4bP46467 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps4bP46467 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4bP46467 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4bP46467 Gm2399-201ENSMUST00000104944 225 ntBASIC17.92■□□□□ 0.46
Vps4bP46467 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.92■□□□□ 0.46
Vps4bP46467 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4bP46467 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.92■□□□□ 0.46
Vps4bP46467 Gm38285-201ENSMUST00000192928 922 ntBASIC17.92■□□□□ 0.46
Vps4bP46467 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4bP46467 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4bP46467 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4bP46467 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4bP46467 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps4bP46467 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Vps4bP46467 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.91■□□□□ 0.46
Vps4bP46467 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Vps4bP46467 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vps4bP46467 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Vps4bP46467 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4bP46467 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.9■□□□□ 0.46
Vps4bP46467 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Vps4bP46467 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.9■□□□□ 0.46
Vps4bP46467 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.9■□□□□ 0.46
Vps4bP46467 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms