Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Gm11643-201ENSMUST00000119578 864 ntBASIC14.17□□□□□ -0.14
Cd27P41272 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cd27P41272 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd27P41272 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.17□□□□□ -0.14
Cd27P41272 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.17□□□□□ -0.14
Cd27P41272 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cd27P41272 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cd27P41272 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.16□□□□□ -0.14
Cd27P41272 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Cd27P41272 Gm15378-201ENSMUST00000121894 207 ntBASIC14.16□□□□□ -0.14
Cd27P41272 Gm6576-201ENSMUST00000169678 883 ntBASIC14.16□□□□□ -0.14
Cd27P41272 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cd27P41272 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.16□□□□□ -0.14
Cd27P41272 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cd27P41272 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.16□□□□□ -0.14
Cd27P41272 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd27P41272 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Cd27P41272 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.15□□□□□ -0.14
Cd27P41272 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.15□□□□□ -0.14
Cd27P41272 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.15□□□□□ -0.14
Cd27P41272 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cd27P41272 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cd27P41272 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cd27P41272 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd27P41272 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Cd27P41272 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Cd27P41272 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cd27P41272 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cd27P41272 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.14□□□□□ -0.15
Cd27P41272 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Mir8112-201ENSMUST00000184382 131 ntBASIC14.14□□□□□ -0.15
Cd27P41272 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.14□□□□□ -0.15
Cd27P41272 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.14□□□□□ -0.15
Cd27P41272 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.14□□□□□ -0.15
Cd27P41272 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd27P41272 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cd27P41272 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.14□□□□□ -0.15
Cd27P41272 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cd27P41272 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cd27P41272 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cd27P41272 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd27P41272 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms