Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox6P40645 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sox6P40645 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox6P40645 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox6P40645 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox6P40645 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox6P40645 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sox6P40645 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sox6P40645 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox6P40645 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox6P40645 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox6P40645 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Sox6P40645 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sox6P40645 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sox6P40645 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox6P40645 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox6P40645 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.62■□□□□ 0.25
Sox6P40645 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Sox6P40645 Gm37179-201ENSMUST00000194862 823 ntBASIC16.62■□□□□ 0.25
Sox6P40645 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sox6P40645 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.62■□□□□ 0.25
Sox6P40645 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox6P40645 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sox6P40645 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.61■□□□□ 0.25
Sox6P40645 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.61■□□□□ 0.25
Sox6P40645 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.61■□□□□ 0.25
Sox6P40645 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.61■□□□□ 0.25
Sox6P40645 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox6P40645 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox6P40645 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sox6P40645 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox6P40645 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox6P40645 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.6■□□□□ 0.25
Sox6P40645 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.6■□□□□ 0.25
Sox6P40645 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.6■□□□□ 0.25
Sox6P40645 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox6P40645 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox6P40645 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox6P40645 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sox6P40645 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox6P40645 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.59■□□□□ 0.25
Sox6P40645 Gm6365-201ENSMUST00000054711 744 ntBASIC16.59■□□□□ 0.25
Sox6P40645 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.59■□□□□ 0.25
Sox6P40645 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.59■□□□□ 0.25
Sox6P40645 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox6P40645 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms