Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cxcl12P40224 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cxcl12P40224 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cxcl12P40224 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cxcl12P40224 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl12P40224 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl12P40224 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl12P40224 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.26■□□□□ 0.51
Cxcl12P40224 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Cxcl12P40224 Mir8098-201ENSMUST00000184011 137 ntBASIC18.26■□□□□ 0.51
Cxcl12P40224 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl12P40224 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl12P40224 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl12P40224 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl12P40224 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.26■□□□□ 0.51
Cxcl12P40224 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl12P40224 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Cxcl12P40224 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.25■□□□□ 0.51
Cxcl12P40224 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.25■□□□□ 0.51
Cxcl12P40224 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cxcl12P40224 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Cxcl12P40224 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.25■□□□□ 0.51
Cxcl12P40224 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cxcl12P40224 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.25■□□□□ 0.51
Cxcl12P40224 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl12P40224 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.24■□□□□ 0.51
Cxcl12P40224 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cxcl12P40224 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.24■□□□□ 0.51
Cxcl12P40224 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.24■□□□□ 0.51
Cxcl12P40224 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.24■□□□□ 0.51
Cxcl12P40224 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 AW822252-206ENSMUST00000208904 237 ntBASIC18.24■□□□□ 0.51
Cxcl12P40224 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 Gm10566-201ENSMUST00000086739 996 ntBASIC18.24■□□□□ 0.51
Cxcl12P40224 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl12P40224 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.23■□□□□ 0.51
Cxcl12P40224 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cxcl12P40224 Gm37722-201ENSMUST00000193757 208 ntBASIC18.23■□□□□ 0.51
Cxcl12P40224 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl12P40224 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cxcl12P40224 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cxcl12P40224 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.22■□□□□ 0.51
Cxcl12P40224 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.22■□□□□ 0.51
Cxcl12P40224 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cxcl12P40224 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cxcl12P40224 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.22■□□□□ 0.51
Cxcl12P40224 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.22■□□□□ 0.51
Cxcl12P40224 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl12P40224 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cxcl12P40224 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Olfr129-201ENSMUST00000122318 993 ntBASIC18.21■□□□□ 0.51
Cxcl12P40224 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms