Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vcam1P29533 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.45■□□□□ 0.86
Vcam1P29533 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Vcam1P29533 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcam1P29533 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Vcam1P29533 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcam1P29533 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcam1P29533 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vcam1P29533 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Vcam1P29533 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vcam1P29533 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.44■□□□□ 0.86
Vcam1P29533 Gm7370-201ENSMUST00000219471 767 ntBASIC20.44■□□□□ 0.86
Vcam1P29533 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcam1P29533 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcam1P29533 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcam1P29533 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcam1P29533 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vcam1P29533 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Vcam1P29533 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Vcam1P29533 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Idnk-204ENSMUST00000226010 1898 ntBASIC20.43■□□□□ 0.86
Vcam1P29533 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcam1P29533 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcam1P29533 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Vcam1P29533 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.42■□□□□ 0.86
Vcam1P29533 Gm16061-201ENSMUST00000122167 857 ntBASIC20.42■□□□□ 0.86
Vcam1P29533 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcam1P29533 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcam1P29533 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcam1P29533 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcam1P29533 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vcam1P29533 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcam1P29533 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcam1P29533 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.41■□□□□ 0.86
Vcam1P29533 Gm6345-202ENSMUST00000180900 204 ntBASIC20.41■□□□□ 0.86
Vcam1P29533 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.41■□□□□ 0.86
Vcam1P29533 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcam1P29533 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcam1P29533 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
Vcam1P29533 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.4■□□□□ 0.86
Vcam1P29533 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vcam1P29533 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcam1P29533 Gm22697-201ENSMUST00000175194 63 ntBASIC20.4■□□□□ 0.86
Vcam1P29533 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcam1P29533 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vcam1P29533 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.4■□□□□ 0.86
Vcam1P29533 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.4■□□□□ 0.86
Vcam1P29533 Gm21362-201ENSMUST00000194272 928 ntBASIC20.4■□□□□ 0.86
Vcam1P29533 Gm9731-201ENSMUST00000209480 747 ntBASIC20.4■□□□□ 0.86
Vcam1P29533 Il3ra-202ENSMUST00000223589 738 ntBASIC20.4■□□□□ 0.86
Vcam1P29533 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcam1P29533 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vcam1P29533 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcam1P29533 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vcam1P29533 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vcam1P29533 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.39■□□□□ 0.86
Vcam1P29533 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Vcam1P29533 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Vcam1P29533 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Gm18101-201ENSMUST00000215769 548 ntBASIC20.39■□□□□ 0.85
Vcam1P29533 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Iqck-206ENSMUST00000208658 2891 ntBASIC20.39■□□□□ 0.85
Vcam1P29533 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.39■□□□□ 0.85
Vcam1P29533 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Vcam1P29533 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vcam1P29533 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vcam1P29533 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vcam1P29533 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcam1P29533 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcam1P29533 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vcam1P29533 AA414768-201ENSMUST00000121924 1257 ntBASIC20.38■□□□□ 0.85
Vcam1P29533 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms