Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rpl3P27659 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpl3P27659 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rpl3P27659 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rpl3P27659 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpl3P27659 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpl3P27659 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.81■□□□□ 0.28
Rpl3P27659 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rpl3P27659 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.81■□□□□ 0.28
Rpl3P27659 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rpl3P27659 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rpl3P27659 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl3P27659 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.8■□□□□ 0.28
Rpl3P27659 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.8■□□□□ 0.28
Rpl3P27659 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rpl3P27659 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rpl3P27659 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.8■□□□□ 0.28
Rpl3P27659 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.8■□□□□ 0.28
Rpl3P27659 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpl3P27659 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpl3P27659 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpl3P27659 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.79■□□□□ 0.28
Rpl3P27659 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.79■□□□□ 0.28
Rpl3P27659 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpl3P27659 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.79■□□□□ 0.28
Rpl3P27659 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpl3P27659 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Gm12933-201ENSMUST00000120203 872 ntBASIC16.79■□□□□ 0.28
Rpl3P27659 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Rpl3P27659 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.79■□□□□ 0.28
Rpl3P27659 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpl3P27659 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.79■□□□□ 0.28
Rpl3P27659 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpl3P27659 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpl3P27659 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rpl3P27659 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rpl3P27659 Gm29791-202ENSMUST00000207888 369 ntBASIC16.78■□□□□ 0.28
Rpl3P27659 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.78■□□□□ 0.28
Rpl3P27659 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rpl3P27659 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.78■□□□□ 0.28
Rpl3P27659 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpl3P27659 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpl3P27659 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpl3P27659 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpl3P27659 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpl3P27659 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpl3P27659 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpl3P27659 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpl3P27659 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
Rpl3P27659 Gm13148-201ENSMUST00000118892 745 ntBASIC16.77■□□□□ 0.28
Rpl3P27659 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rpl3P27659 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.77■□□□□ 0.28
Rpl3P27659 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms