Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.04■□□□□ 0.16
Cd40P27512 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.03■□□□□ 0.16
Cd40P27512 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cd40P27512 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Gm13168-201ENSMUST00000121771 632 ntBASIC16.03■□□□□ 0.16
Cd40P27512 Gm15378-201ENSMUST00000121894 207 ntBASIC16.03■□□□□ 0.16
Cd40P27512 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.03■□□□□ 0.16
Cd40P27512 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Gm8520-201ENSMUST00000186517 868 ntBASIC16.03■□□□□ 0.16
Cd40P27512 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.03■□□□□ 0.16
Cd40P27512 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Cd40P27512 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.03■□□□□ 0.16
Cd40P27512 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cd40P27512 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd40P27512 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Cd40P27512 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd40P27512 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cd40P27512 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd40P27512 Gm42545-201ENSMUST00000202755 922 ntBASIC16.02■□□□□ 0.16
Cd40P27512 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.02■□□□□ 0.16
Cd40P27512 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd40P27512 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd40P27512 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd40P27512 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.02■□□□□ 0.15
Cd40P27512 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd40P27512 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd40P27512 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd40P27512 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.02■□□□□ 0.15
Cd40P27512 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd40P27512 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cd40P27512 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd40P27512 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cd40P27512 Gm13401-201ENSMUST00000117074 291 ntBASIC16.01■□□□□ 0.15
Cd40P27512 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.01■□□□□ 0.15
Cd40P27512 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.01■□□□□ 0.15
Cd40P27512 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd40P27512 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cd40P27512 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cd40P27512 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd40P27512 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd40P27512 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cd40P27512 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16■□□□□ 0.15
Cd40P27512 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd40P27512 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd40P27512 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cd40P27512 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd40P27512 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cd40P27512 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cd40P27512 Gm6576-201ENSMUST00000169678 883 ntBASIC16■□□□□ 0.15
Cd40P27512 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cd40P27512 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd40P27512 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cd40P27512 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd40P27512 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Cd40P27512 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Gm12382-201ENSMUST00000122005 922 ntBASIC15.99■□□□□ 0.15
Cd40P27512 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Gm27011-201ENSMUST00000182352 972 ntBASIC15.99■□□□□ 0.15
Cd40P27512 Gm10698-201ENSMUST00000182663 604 ntBASIC15.99■□□□□ 0.15
Cd40P27512 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Gm37292-201ENSMUST00000192062 758 ntBASIC15.99■□□□□ 0.15
Cd40P27512 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cd40P27512 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd40P27512 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cd40P27512 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd40P27512 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd40P27512 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd40P27512 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd40P27512 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cd40P27512 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.98■□□□□ 0.15
Cd40P27512 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cd40P27512 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.98■□□□□ 0.15
Cd40P27512 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd40P27512 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms