Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sod1P08228 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sod1P08228 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.7■□□□□ 0.26
Sod1P08228 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sod1P08228 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sod1P08228 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sod1P08228 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sod1P08228 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Sod1P08228 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Sod1P08228 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sod1P08228 Gm5587-201ENSMUST00000206270 674 ntBASIC16.69■□□□□ 0.26
Sod1P08228 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sod1P08228 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
Sod1P08228 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sod1P08228 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sod1P08228 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sod1P08228 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Sod1P08228 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sod1P08228 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Sod1P08228 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sod1P08228 Gm9103-201ENSMUST00000119371 405 ntBASIC16.68■□□□□ 0.26
Sod1P08228 Gm7284-201ENSMUST00000131667 944 ntBASIC16.68■□□□□ 0.26
Sod1P08228 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.68■□□□□ 0.26
Sod1P08228 Gm27741-201ENSMUST00000185060 237 ntBASIC16.68■□□□□ 0.26
Sod1P08228 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.68■□□□□ 0.26
Sod1P08228 Gm7213-201ENSMUST00000215977 950 ntBASIC16.68■□□□□ 0.26
Sod1P08228 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sod1P08228 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sod1P08228 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sod1P08228 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Sod1P08228 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sod1P08228 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sod1P08228 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.67■□□□□ 0.26
Sod1P08228 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Sod1P08228 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.67■□□□□ 0.26
Sod1P08228 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.67■□□□□ 0.26
Sod1P08228 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sod1P08228 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sod1P08228 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.66■□□□□ 0.26
Sod1P08228 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Gm9013-201ENSMUST00000132939 882 ntBASIC16.66■□□□□ 0.26
Sod1P08228 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sod1P08228 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.66■□□□□ 0.26
Sod1P08228 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sod1P08228 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.66■□□□□ 0.26
Sod1P08228 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sod1P08228 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sod1P08228 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sod1P08228 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.65■□□□□ 0.26
Sod1P08228 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.65■□□□□ 0.26
Sod1P08228 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Sod1P08228 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sod1P08228 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.65■□□□□ 0.26
Sod1P08228 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sod1P08228 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sod1P08228 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sod1P08228 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Sod1P08228 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Sod1P08228 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sod1P08228 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sod1P08228 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sod1P08228 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sod1P08228 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sod1P08228 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sod1P08228 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sod1P08228 Gm29518-201ENSMUST00000190858 372 ntBASIC16.64■□□□□ 0.25
Sod1P08228 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sod1P08228 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms