Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.79■□□□□ 0.28
ApoeP08226 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.78■□□□□ 0.28
ApoeP08226 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ApoeP08226 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.78■□□□□ 0.28
ApoeP08226 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ApoeP08226 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.78■□□□□ 0.28
ApoeP08226 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ApoeP08226 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ApoeP08226 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ApoeP08226 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ApoeP08226 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ApoeP08226 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ApoeP08226 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ApoeP08226 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ApoeP08226 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ApoeP08226 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ApoeP08226 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ApoeP08226 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ApoeP08226 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ApoeP08226 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ApoeP08226 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.76■□□□□ 0.27
ApoeP08226 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ApoeP08226 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ApoeP08226 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
ApoeP08226 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.76■□□□□ 0.27
ApoeP08226 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.76■□□□□ 0.27
ApoeP08226 Gm43060-201ENSMUST00000200621 289 ntBASIC16.76■□□□□ 0.27
ApoeP08226 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ApoeP08226 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.76■□□□□ 0.27
ApoeP08226 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ApoeP08226 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ApoeP08226 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ApoeP08226 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ApoeP08226 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ApoeP08226 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
ApoeP08226 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.76■□□□□ 0.27
ApoeP08226 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ApoeP08226 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ApoeP08226 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ApoeP08226 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
ApoeP08226 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ApoeP08226 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.74■□□□□ 0.27
ApoeP08226 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Gm27454-201ENSMUST00000185090 204 ntBASIC16.74■□□□□ 0.27
ApoeP08226 Gm43017-201ENSMUST00000198296 752 ntBASIC16.74■□□□□ 0.27
ApoeP08226 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.74■□□□□ 0.27
ApoeP08226 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
ApoeP08226 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ApoeP08226 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.74■□□□□ 0.27
ApoeP08226 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ApoeP08226 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ApoeP08226 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ApoeP08226 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ApoeP08226 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ApoeP08226 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.73■□□□□ 0.27
ApoeP08226 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
ApoeP08226 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms