Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a2P08122 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a2P08122 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.56■□□□□ 0.24
Col4a2P08122 Gm13401-201ENSMUST00000117074 291 ntBASIC16.56■□□□□ 0.24
Col4a2P08122 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a2P08122 Gm17661-201ENSMUST00000170317 270 ntBASIC16.56■□□□□ 0.24
Col4a2P08122 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a2P08122 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Col4a2P08122 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a2P08122 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a2P08122 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.55■□□□□ 0.24
Col4a2P08122 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col4a2P08122 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.55■□□□□ 0.24
Col4a2P08122 Gm7791-201ENSMUST00000219066 539 ntBASIC16.55■□□□□ 0.24
Col4a2P08122 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col4a2P08122 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a2P08122 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.55■□□□□ 0.24
Col4a2P08122 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a2P08122 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.54■□□□□ 0.24
Col4a2P08122 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.54■□□□□ 0.24
Col4a2P08122 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a2P08122 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col4a2P08122 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.54■□□□□ 0.24
Col4a2P08122 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a2P08122 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a2P08122 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a2P08122 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a2P08122 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col4a2P08122 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col4a2P08122 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col4a2P08122 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a2P08122 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col4a2P08122 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a2P08122 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Col4a2P08122 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col4a2P08122 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a2P08122 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a2P08122 Gm13474-201ENSMUST00000122466 815 ntBASIC16.52■□□□□ 0.24
Col4a2P08122 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a2P08122 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.52■□□□□ 0.24
Col4a2P08122 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.52■□□□□ 0.24
Col4a2P08122 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a2P08122 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a2P08122 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a2P08122 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a2P08122 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a2P08122 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a2P08122 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a2P08122 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a2P08122 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a2P08122 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a2P08122 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Col4a2P08122 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a2P08122 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.51■□□□□ 0.23
Col4a2P08122 Gm25016-201ENSMUST00000158399 131 ntBASIC16.51■□□□□ 0.23
Col4a2P08122 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a2P08122 Gm9731-201ENSMUST00000209480 747 ntBASIC16.51■□□□□ 0.23
Col4a2P08122 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col4a2P08122 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a2P08122 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.51■□□□□ 0.23
Col4a2P08122 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a2P08122 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a2P08122 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.5■□□□□ 0.23
Col4a2P08122 Gm24841-201ENSMUST00000158676 357 ntBASIC16.5■□□□□ 0.23
Col4a2P08122 Gm28033-201ENSMUST00000184224 96 ntBASIC16.5■□□□□ 0.23
Col4a2P08122 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Col4a2P08122 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a2P08122 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a2P08122 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a2P08122 Gm7638-201ENSMUST00000121348 967 ntBASIC16.5■□□□□ 0.23
Col4a2P08122 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Col4a2P08122 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a2P08122 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.5■□□□□ 0.23
Col4a2P08122 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a2P08122 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.49■□□□□ 0.23
Col4a2P08122 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Grk6-206ENSMUST00000224995 2971 ntBASIC16.49■□□□□ 0.23
Col4a2P08122 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Gm17807-201ENSMUST00000186869 298 ntBASIC16.49■□□□□ 0.23
Col4a2P08122 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms