Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.21■□□□□ 0.03
P04946 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04946 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04946 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
P04946 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.2■□□□□ 0.02
P04946 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.2■□□□□ 0.02
P04946 Gm24841-201ENSMUST00000158676 357 ntBASIC15.2■□□□□ 0.02
P04946 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.2■□□□□ 0.02
P04946 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
P04946 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
P04946 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
P04946 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
P04946 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
P04946 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.2■□□□□ 0.02
P04946 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
P04946 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04946 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
P04946 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
P04946 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.19■□□□□ 0.02
P04946 Idnk-204ENSMUST00000226010 1898 ntBASIC15.19■□□□□ 0.02
P04946 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
P04946 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Gm27463-201ENSMUST00000183569 57 ntBASIC15.19■□□□□ 0.02
P04946 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
P04946 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
P04946 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04946 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
P04946 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
P04946 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.18■□□□□ 0.02
P04946 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
P04946 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.18■□□□□ 0.02
P04946 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
P04946 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
P04946 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04946 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
P04946 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
P04946 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
P04946 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.17■□□□□ 0.02
P04946 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04946 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P04946 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P04946 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms