Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.38■□□□□ 0.53
PrnpP04925 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PrnpP04925 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PrnpP04925 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PrnpP04925 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.38■□□□□ 0.53
PrnpP04925 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.38■□□□□ 0.53
PrnpP04925 Gm27741-201ENSMUST00000185060 237 ntBASIC18.38■□□□□ 0.53
PrnpP04925 Gm37025-201ENSMUST00000195159 829 ntBASIC18.38■□□□□ 0.53
PrnpP04925 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PrnpP04925 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PrnpP04925 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PrnpP04925 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.37■□□□□ 0.53
PrnpP04925 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.37■□□□□ 0.53
PrnpP04925 Gm9731-201ENSMUST00000209480 747 ntBASIC18.37■□□□□ 0.53
PrnpP04925 Gm7370-201ENSMUST00000219471 767 ntBASIC18.37■□□□□ 0.53
PrnpP04925 Gm21559-201ENSMUST00000220638 855 ntBASIC18.37■□□□□ 0.53
PrnpP04925 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Gm8587-201ENSMUST00000076538 843 ntBASIC18.37■□□□□ 0.53
PrnpP04925 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrnpP04925 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PrnpP04925 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PrnpP04925 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PrnpP04925 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.36■□□□□ 0.53
PrnpP04925 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PrnpP04925 Mir1668-201ENSMUST00000184114 107 ntBASIC18.36■□□□□ 0.53
PrnpP04925 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.36■□□□□ 0.53
PrnpP04925 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PrnpP04925 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PrnpP04925 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PrnpP04925 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.36■□□□□ 0.53
PrnpP04925 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PrnpP04925 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PrnpP04925 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PrnpP04925 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PrnpP04925 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PrnpP04925 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.35■□□□□ 0.53
PrnpP04925 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PrnpP04925 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.35■□□□□ 0.53
PrnpP04925 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PrnpP04925 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PrnpP04925 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.35■□□□□ 0.53
PrnpP04925 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PrnpP04925 Gm9103-201ENSMUST00000119371 405 ntBASIC18.35■□□□□ 0.53
PrnpP04925 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PrnpP04925 Il3ra-202ENSMUST00000223589 738 ntBASIC18.35■□□□□ 0.53
PrnpP04925 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PrnpP04925 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.35■□□□□ 0.53
PrnpP04925 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.35■□□□□ 0.53
PrnpP04925 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PrnpP04925 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PrnpP04925 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PrnpP04925 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PrnpP04925 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.34■□□□□ 0.53
PrnpP04925 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.34■□□□□ 0.53
PrnpP04925 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.34■□□□□ 0.53
PrnpP04925 Gm17661-201ENSMUST00000170317 270 ntBASIC18.34■□□□□ 0.53
PrnpP04925 Ank2-226ENSMUST00000189368 339 ntBASIC18.34■□□□□ 0.53
PrnpP04925 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.34■□□□□ 0.53
PrnpP04925 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PrnpP04925 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrnpP04925 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PrnpP04925 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PrnpP04925 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PrnpP04925 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PrnpP04925 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PrnpP04925 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PrnpP04925 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PrnpP04925 Gm7284-201ENSMUST00000131667 944 ntBASIC18.33■□□□□ 0.52
PrnpP04925 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.33■□□□□ 0.52
PrnpP04925 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms