Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Hoxa3P02831 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hoxa3P02831 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Hoxa3P02831 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Hoxa3P02831 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.83□□□□□ -0.03
Hoxa3P02831 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Hoxa3P02831 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.83□□□□□ -0.03
Hoxa3P02831 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.83□□□□□ -0.03
Hoxa3P02831 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hoxa3P02831 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hoxa3P02831 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hoxa3P02831 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa3P02831 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.82□□□□□ -0.04
Hoxa3P02831 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxa3P02831 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxa3P02831 Gm10138-203ENSMUST00000206952 366 ntBASIC14.82□□□□□ -0.04
Hoxa3P02831 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxa3P02831 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Hoxa3P02831 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa3P02831 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxa3P02831 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Hoxa3P02831 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Gm15375-201ENSMUST00000119510 849 ntBASIC14.81□□□□□ -0.04
Hoxa3P02831 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.81□□□□□ -0.04
Hoxa3P02831 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.81□□□□□ -0.04
Hoxa3P02831 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.81□□□□□ -0.04
Hoxa3P02831 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxa3P02831 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa3P02831 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.8□□□□□ -0.04
Hoxa3P02831 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.8□□□□□ -0.04
Hoxa3P02831 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hoxa3P02831 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxa3P02831 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hoxa3P02831 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxa3P02831 Gm43183-201ENSMUST00000200632 547 ntBASIC14.8□□□□□ -0.04
Hoxa3P02831 Gm42545-201ENSMUST00000202755 922 ntBASIC14.8□□□□□ -0.04
Hoxa3P02831 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxa3P02831 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hoxa3P02831 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxa3P02831 Gm18025-201ENSMUST00000221733 862 ntBASIC14.8□□□□□ -0.04
Hoxa3P02831 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa3P02831 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxa3P02831 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Hoxa3P02831 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.79□□□□□ -0.04
Hoxa3P02831 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms