Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Gm29791-202ENSMUST00000207888 369 ntBASIC19.26■□□□□ 0.67
P01734 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
P01734 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.26■□□□□ 0.67
P01734 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P01734 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P01734 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
P01734 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.26■□□□□ 0.67
P01734 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P01734 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01734 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01734 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01734 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
P01734 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.25■□□□□ 0.67
P01734 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
P01734 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01734 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01734 Gm13401-201ENSMUST00000117074 291 ntBASIC19.25■□□□□ 0.67
P01734 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P01734 Mir6982-201ENSMUST00000184354 68 ntBASIC19.25■□□□□ 0.67
P01734 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01734 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01734 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P01734 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.24■□□□□ 0.67
P01734 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01734 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.24■□□□□ 0.67
P01734 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01734 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.24■□□□□ 0.67
P01734 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
P01734 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P01734 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01734 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01734 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.24■□□□□ 0.67
P01734 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01734 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
P01734 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Idnk-204ENSMUST00000226010 1898 ntBASIC19.23■□□□□ 0.67
P01734 Gm10418-201ENSMUST00000100943 576 ntBASIC19.23■□□□□ 0.67
P01734 Mir5122-201ENSMUST00000175004 89 ntBASIC19.23■□□□□ 0.67
P01734 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
P01734 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01734 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
P01734 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
P01734 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.22■□□□□ 0.67
P01734 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
P01734 Gm10517-202ENSMUST00000192970 758 ntBASIC19.22■□□□□ 0.67
P01734 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.22■□□□□ 0.67
P01734 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.22■□□□□ 0.67
P01734 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.22■□□□□ 0.67
P01734 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
P01734 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01734 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01734 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01734 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
P01734 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01734 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.21■□□□□ 0.67
P01734 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.21■□□□□ 0.67
P01734 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
P01734 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.21■□□□□ 0.67
P01734 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01734 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P01734 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P01734 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01734 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms