Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Apaf1O88879 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Apaf1O88879 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Apaf1O88879 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Apaf1O88879 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Apaf1O88879 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
Apaf1O88879 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Apaf1O88879 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Apaf1O88879 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC23.05■■□□□ 1.28
Apaf1O88879 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC23.05■■□□□ 1.28
Apaf1O88879 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Apaf1O88879 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Apaf1O88879 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Apaf1O88879 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC23.04■■□□□ 1.28
Apaf1O88879 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Apaf1O88879 Otx2os1-204ENSMUST00000227221 751 ntBASIC23.04■■□□□ 1.28
Apaf1O88879 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Apaf1O88879 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Apaf1O88879 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Apaf1O88879 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Apaf1O88879 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23.03■■□□□ 1.28
Apaf1O88879 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC23.03■■□□□ 1.28
Apaf1O88879 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Apaf1O88879 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC23.03■■□□□ 1.28
Apaf1O88879 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Apaf1O88879 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.03■■□□□ 1.28
Apaf1O88879 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Apaf1O88879 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Apaf1O88879 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 Gm20472-201ENSMUST00000174403 1240 ntBASIC23.02■■□□□ 1.28
Apaf1O88879 Gm21814-202ENSMUST00000203277 873 ntBASIC23.02■■□□□ 1.28
Apaf1O88879 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Apaf1O88879 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Apaf1O88879 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Apaf1O88879 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Apaf1O88879 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
Apaf1O88879 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Apaf1O88879 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
Apaf1O88879 Arhgef4-208ENSMUST00000211073 171 ntBASIC23.01■■□□□ 1.27
Apaf1O88879 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Apaf1O88879 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Apaf1O88879 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Apaf1O88879 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Gm12085-201ENSMUST00000119263 940 ntBASIC23■■□□□ 1.27
Apaf1O88879 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC23■■□□□ 1.27
Apaf1O88879 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Gm5417-201ENSMUST00000079706 384 ntBASIC23■■□□□ 1.27
Apaf1O88879 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC23■■□□□ 1.27
Apaf1O88879 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Apaf1O88879 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Apaf1O88879 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Apaf1O88879 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Apaf1O88879 Gm10418-201ENSMUST00000100943 576 ntBASIC22.99■■□□□ 1.27
Apaf1O88879 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Apaf1O88879 Gm15565-201ENSMUST00000118890 427 ntBASIC22.99■■□□□ 1.27
Apaf1O88879 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.99■■□□□ 1.27
Apaf1O88879 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Apaf1O88879 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Apaf1O88879 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC22.99■■□□□ 1.27
Apaf1O88879 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC22.99■■□□□ 1.27
Apaf1O88879 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Apaf1O88879 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Apaf1O88879 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms