Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.04■□□□□ 0.32
Best1O88870 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.04■□□□□ 0.32
Best1O88870 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Best1O88870 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Mir8112-201ENSMUST00000184382 131 ntBASIC17.04■□□□□ 0.32
Best1O88870 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Best1O88870 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.04■□□□□ 0.32
Best1O88870 Fst-202ENSMUST00000223640 2612 ntBASIC17.04■□□□□ 0.32
Best1O88870 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Best1O88870 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Best1O88870 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.03■□□□□ 0.32
Best1O88870 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Best1O88870 Gm9987-201ENSMUST00000069768 567 ntBASIC17.03■□□□□ 0.32
Best1O88870 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.03■□□□□ 0.32
Best1O88870 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Best1O88870 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Best1O88870 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Best1O88870 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Best1O88870 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Best1O88870 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Best1O88870 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Best1O88870 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Best1O88870 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Best1O88870 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.02■□□□□ 0.32
Best1O88870 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Best1O88870 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Best1O88870 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.02■□□□□ 0.31
Best1O88870 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Best1O88870 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Best1O88870 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Best1O88870 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Best1O88870 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Best1O88870 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.01■□□□□ 0.31
Best1O88870 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.01■□□□□ 0.31
Best1O88870 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Best1O88870 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Best1O88870 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Best1O88870 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Best1O88870 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17■□□□□ 0.31
Best1O88870 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Best1O88870 Gm37025-201ENSMUST00000195159 829 ntBASIC17■□□□□ 0.31
Best1O88870 Gm43353-201ENSMUST00000199224 1295 ntBASIC17■□□□□ 0.31
Best1O88870 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Best1O88870 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Best1O88870 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Best1O88870 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Best1O88870 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Best1O88870 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Best1O88870 Gm7638-201ENSMUST00000121348 967 ntBASIC16.99■□□□□ 0.31
Best1O88870 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.99■□□□□ 0.31
Best1O88870 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Best1O88870 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Best1O88870 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Best1O88870 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.99■□□□□ 0.31
Best1O88870 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Best1O88870 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Best1O88870 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Best1O88870 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Best1O88870 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms