Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.36■□□□□ 0.21
Cops4O88544 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.36■□□□□ 0.21
Cops4O88544 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Cops4O88544 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cops4O88544 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Cops4O88544 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cops4O88544 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cops4O88544 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cops4O88544 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.35■□□□□ 0.21
Cops4O88544 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.35■□□□□ 0.21
Cops4O88544 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cops4O88544 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops4O88544 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.34■□□□□ 0.21
Cops4O88544 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.34■□□□□ 0.21
Cops4O88544 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Cops4O88544 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Cops4O88544 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.34■□□□□ 0.21
Cops4O88544 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops4O88544 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.34■□□□□ 0.21
Cops4O88544 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cops4O88544 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.33■□□□□ 0.2
Cops4O88544 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.33■□□□□ 0.2
Cops4O88544 Gm9988-201ENSMUST00000069786 435 ntBASIC16.33■□□□□ 0.2
Cops4O88544 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cops4O88544 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops4O88544 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.32■□□□□ 0.2
Cops4O88544 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Cops4O88544 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cops4O88544 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cops4O88544 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.32■□□□□ 0.2
Cops4O88544 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.32■□□□□ 0.2
Cops4O88544 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cops4O88544 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops4O88544 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms