Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Gm43338-201ENSMUST00000198617 2223 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC10.8□□□□□ -0.68
Gm10139O88245 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm10139O88245 Gm43294-201ENSMUST00000202850 2490 ntBASIC10.8□□□□□ -0.68
Gm10139O88245 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gm10139O88245 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC10.8□□□□□ -0.68
Gm10139O88245 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Gm10418-201ENSMUST00000100943 576 ntBASIC10.8□□□□□ -0.68
Gm10139O88245 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Gm10139O88245 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Gm6211-202ENSMUST00000167849 925 ntBASIC10.8□□□□□ -0.68
Gm10139O88245 Mir8112-201ENSMUST00000184382 131 ntBASIC10.8□□□□□ -0.68
Gm10139O88245 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.8□□□□□ -0.68
Gm10139O88245 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.8□□□□□ -0.68
Gm10139O88245 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Gm10139O88245 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Gm10139O88245 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm10139O88245 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Gm9954-202ENSMUST00000198686 4725 ntBASIC10.8□□□□□ -0.68
Gm10139O88245 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10139O88245 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm10139O88245 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC10.79□□□□□ -0.68
Gm10139O88245 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC10.79□□□□□ -0.68
Gm10139O88245 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.79□□□□□ -0.68
Gm10139O88245 Wnt10b-205ENSMUST00000226846 1204 ntBASIC10.79□□□□□ -0.68
Gm10139O88245 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Zfp783-201ENSMUST00000095946 670 ntBASIC10.79□□□□□ -0.68
Gm10139O88245 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm10139O88245 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC10.79□□□□□ -0.68
Gm10139O88245 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Gm10139O88245 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 AC108858.1-201ENSMUST00000228461 1498 ntBASIC10.79□□□□□ -0.68
Gm10139O88245 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10139O88245 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gm10139O88245 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Gm10139O88245 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10139O88245 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10139O88245 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Gm10139O88245 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm10139O88245 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm10139O88245 Gm10849-201ENSMUST00000100397 618 ntBASIC10.78□□□□□ -0.68
Gm10139O88245 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10139O88245 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10139O88245 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm10139O88245 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10139O88245 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm10139O88245 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm10139O88245 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm10139O88245 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm10139O88245 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10139O88245 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm10139O88245 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10139O88245 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms