Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ttc3O88196 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ttc3O88196 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Gm7370-201ENSMUST00000219471 767 ntBASIC18.6■□□□□ 0.57
Ttc3O88196 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc3O88196 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ttc3O88196 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.59■□□□□ 0.57
Ttc3O88196 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.59■□□□□ 0.57
Ttc3O88196 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.59■□□□□ 0.57
Ttc3O88196 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ttc3O88196 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.59■□□□□ 0.57
Ttc3O88196 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.59■□□□□ 0.57
Ttc3O88196 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ttc3O88196 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc3O88196 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ttc3O88196 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ttc3O88196 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ttc3O88196 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ttc3O88196 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ttc3O88196 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ttc3O88196 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Ttc3O88196 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc3O88196 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.58■□□□□ 0.56
Ttc3O88196 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.58■□□□□ 0.56
Ttc3O88196 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc3O88196 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.58■□□□□ 0.56
Ttc3O88196 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc3O88196 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc3O88196 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc3O88196 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc3O88196 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc3O88196 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc3O88196 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Gm24841-201ENSMUST00000158676 357 ntBASIC18.57■□□□□ 0.56
Ttc3O88196 Gm2274-201ENSMUST00000184539 609 ntBASIC18.57■□□□□ 0.56
Ttc3O88196 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Ttc3O88196 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Ttc3O88196 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.57■□□□□ 0.56
Ttc3O88196 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Gm7791-201ENSMUST00000219066 539 ntBASIC18.57■□□□□ 0.56
Ttc3O88196 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc3O88196 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ttc3O88196 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.57■□□□□ 0.56
Ttc3O88196 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ttc3O88196 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ttc3O88196 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ttc3O88196 Gm6345-202ENSMUST00000180900 204 ntBASIC18.56■□□□□ 0.56
Ttc3O88196 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.56■□□□□ 0.56
Ttc3O88196 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ttc3O88196 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ttc3O88196 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ttc3O88196 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ttc3O88196 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ttc3O88196 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.55■□□□□ 0.56
Ttc3O88196 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ttc3O88196 Gm10819-201ENSMUST00000099988 561 ntBASIC18.55■□□□□ 0.56
Ttc3O88196 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Ttc3O88196 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.55■□□□□ 0.56
Ttc3O88196 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc3O88196 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.54■□□□□ 0.56
Ttc3O88196 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Ttc3O88196 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Gm7367-201ENSMUST00000057611 492 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms