Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn5O54942 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.39■□□□□ 0.53
Cldn5O54942 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.39■□□□□ 0.53
Cldn5O54942 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Timm23-208ENSMUST00000226683 750 ntBASIC18.39■□□□□ 0.53
Cldn5O54942 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cldn5O54942 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.39■□□□□ 0.53
Cldn5O54942 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn5O54942 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 Idnk-204ENSMUST00000226010 1898 ntBASIC18.38■□□□□ 0.53
Cldn5O54942 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 Gm3375-201ENSMUST00000203929 796 ntBASIC18.38■□□□□ 0.53
Cldn5O54942 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn5O54942 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.37■□□□□ 0.53
Cldn5O54942 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Cldn5O54942 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.37■□□□□ 0.53
Cldn5O54942 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.37■□□□□ 0.53
Cldn5O54942 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.37■□□□□ 0.53
Cldn5O54942 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Cldn5O54942 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cldn5O54942 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn5O54942 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.36■□□□□ 0.53
Cldn5O54942 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cldn5O54942 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.36■□□□□ 0.53
Cldn5O54942 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn5O54942 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cldn5O54942 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Cldn5O54942 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.35■□□□□ 0.53
Cldn5O54942 Gm4974-201ENSMUST00000209974 875 ntBASIC18.35■□□□□ 0.53
Cldn5O54942 Odf3b-204ENSMUST00000227834 930 ntBASIC18.35■□□□□ 0.53
Cldn5O54942 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cldn5O54942 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn5O54942 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.35■□□□□ 0.53
Cldn5O54942 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cldn5O54942 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.34■□□□□ 0.53
Cldn5O54942 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cldn5O54942 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.34■□□□□ 0.53
Cldn5O54942 Gm43799-201ENSMUST00000201845 579 ntBASIC18.34■□□□□ 0.53
Cldn5O54942 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cldn5O54942 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.34■□□□□ 0.53
Cldn5O54942 Gm30025-201ENSMUST00000218555 728 ntBASIC18.34■□□□□ 0.53
Cldn5O54942 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.34■□□□□ 0.53
Cldn5O54942 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms