Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptlc1O35704 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sptlc1O35704 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptlc1O35704 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptlc1O35704 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sptlc1O35704 Gm2274-201ENSMUST00000184539 609 ntBASIC19.34■□□□□ 0.69
Sptlc1O35704 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptlc1O35704 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sptlc1O35704 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.34■□□□□ 0.69
Sptlc1O35704 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sptlc1O35704 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sptlc1O35704 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Sptlc1O35704 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.33■□□□□ 0.68
Sptlc1O35704 Mir5130-201ENSMUST00000175160 84 ntBASIC19.33■□□□□ 0.68
Sptlc1O35704 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sptlc1O35704 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sptlc1O35704 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sptlc1O35704 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sptlc1O35704 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sptlc1O35704 Gm10418-201ENSMUST00000100943 576 ntBASIC19.32■□□□□ 0.68
Sptlc1O35704 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sptlc1O35704 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Gm24841-201ENSMUST00000158676 357 ntBASIC19.32■□□□□ 0.68
Sptlc1O35704 Gm23634-201ENSMUST00000175071 91 ntBASIC19.32■□□□□ 0.68
Sptlc1O35704 Gm21362-201ENSMUST00000194272 928 ntBASIC19.32■□□□□ 0.68
Sptlc1O35704 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sptlc1O35704 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptlc1O35704 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sptlc1O35704 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sptlc1O35704 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.31■□□□□ 0.68
Sptlc1O35704 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sptlc1O35704 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.31■□□□□ 0.68
Sptlc1O35704 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptlc1O35704 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sptlc1O35704 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptlc1O35704 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sptlc1O35704 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptlc1O35704 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Sptlc1O35704 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptlc1O35704 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.3■□□□□ 0.68
Sptlc1O35704 Gm10013-201ENSMUST00000106074 672 ntBASIC19.3■□□□□ 0.68
Sptlc1O35704 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Sptlc1O35704 Gm13323-201ENSMUST00000120245 1151 ntBASIC19.3■□□□□ 0.68
Sptlc1O35704 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptlc1O35704 Gm18558-201ENSMUST00000186253 1214 ntBASIC19.3■□□□□ 0.68
Sptlc1O35704 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.3■□□□□ 0.68
Sptlc1O35704 Gm10819-201ENSMUST00000099988 561 ntBASIC19.3■□□□□ 0.68
Sptlc1O35704 Golph3-205ENSMUST00000228671 2842 ntBASIC19.3■□□□□ 0.68
Sptlc1O35704 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sptlc1O35704 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.3■□□□□ 0.68
Sptlc1O35704 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.3■□□□□ 0.68
Sptlc1O35704 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sptlc1O35704 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sptlc1O35704 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.29■□□□□ 0.68
Sptlc1O35704 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.29■□□□□ 0.68
Sptlc1O35704 Gm7638-201ENSMUST00000121348 967 ntBASIC19.29■□□□□ 0.68
Sptlc1O35704 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.29■□□□□ 0.68
Sptlc1O35704 Gm29791-202ENSMUST00000207888 369 ntBASIC19.29■□□□□ 0.68
Sptlc1O35704 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.29■□□□□ 0.68
Sptlc1O35704 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.29■□□□□ 0.68
Sptlc1O35704 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms