Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sh3tc1G3X9F6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Gm9013-201ENSMUST00000132939 882 ntBASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3tc1G3X9F6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 Gm7213-201ENSMUST00000215977 950 ntBASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3tc1G3X9F6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3tc1G3X9F6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3tc1G3X9F6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc1G3X9F6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3tc1G3X9F6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3tc1G3X9F6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.39■■□□□ 1.02
Sh3tc1G3X9F6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3tc1G3X9F6 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.39■■□□□ 1.02
Sh3tc1G3X9F6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Sh3tc1G3X9F6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Gm27704-201ENSMUST00000185094 107 ntBASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc1G3X9F6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc1G3X9F6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc1G3X9F6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
Sh3tc1G3X9F6 Gm29518-201ENSMUST00000190858 372 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms