Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh9F8VPK8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Pcdh9F8VPK8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.14■□□□□ 0.5
Pcdh9F8VPK8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh9F8VPK8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh9F8VPK8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Gm29791-202ENSMUST00000207888 369 ntBASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh9F8VPK8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Mir5133-201ENSMUST00000174955 77 ntBASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Zfp783-201ENSMUST00000095946 670 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms