Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Gm15467-201ENSMUST00000120582 445 ntBASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Gm6376-201ENSMUST00000209407 580 ntBASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.96■□□□□ 0.47
Ccdc188F6WEU2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc188F6WEU2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Gm14822-201ENSMUST00000122247 291 ntBASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc188F6WEU2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Gm12644-201ENSMUST00000119935 606 ntBASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Gm2756-201ENSMUST00000195851 400 ntBASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc188F6WEU2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc188F6WEU2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc188F6WEU2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Gm8097-201ENSMUST00000117903 829 ntBASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc188F6WEU2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms